GSVIVT01010855001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor


Gene families : OG_01_0000884 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000884_tree ,
OG_02_0000594 (LandPlants) Phylogenetic Tree(s): OG_02_0000594_tree ,
OG_03_0000583 (SeedPlants) Phylogenetic Tree(s): OG_03_0000583_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010855001
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.04 Archaeplastida
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.04 Archaeplastida
MA_10428386g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_91504g0010 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Pp3c19_2450V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
Pp3c4_7080V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
Solyc07g008540.3.1 No alias transcription factor (BBX-CO) 0.11 Archaeplastida
Zm00001e005433_P002 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Zm00001e036760_P001 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
AMTR_s00049p00156610 evm_27.TU.AmTr_v1... No description available 0.02 LandPlants
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.03 LandPlants
MA_470965g0010 No alias transcription factor (BBX-CO) 0.02 LandPlants
MA_91504g0010 No alias transcription factor (BBX-CO) 0.02 LandPlants
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.02 LandPlants
Solyc07g008540.3.1 No alias transcription factor (BBX-CO) 0.09 LandPlants
Zm00001e036760_P001 No alias transcription factor (BBX-CO) 0.03 LandPlants
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 SeedPlants
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.03 SeedPlants
MA_470965g0010 No alias transcription factor (BBX-CO) 0.03 SeedPlants
Solyc07g008540.3.1 No alias transcription factor (BBX-CO) 0.09 SeedPlants
Zm00001e036760_P001 No alias transcription factor (BBX-CO) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010402 CCT_domain 341 383
No external refs found!