GSVIVT01010259001


Description : Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0008241 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008241_tree ,
OG_02_0006918 (LandPlants) Phylogenetic Tree(s): OG_02_0006918_tree ,
OG_03_0004713 (SeedPlants) Phylogenetic Tree(s): OG_03_0004713_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010259001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 Archaeplastida
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 Archaeplastida
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 Archaeplastida
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 LandPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 LandPlants
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 SeedPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 126 155
IPR002885 Pentatricopeptide_repeat 482 507
IPR002885 Pentatricopeptide_repeat 206 228
IPR002885 Pentatricopeptide_repeat 373 403
IPR002885 Pentatricopeptide_repeat 234 262
IPR002885 Pentatricopeptide_repeat 331 364
IPR002885 Pentatricopeptide_repeat 405 454
No external refs found!