GSVIVT01010112001


Description : Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana


Gene families : OG_01_0011533 (Archaeplastida) Phylogenetic Tree(s): OG_01_0011533_tree ,
OG_02_0011433 (LandPlants) Phylogenetic Tree(s): OG_02_0011433_tree ,
OG_03_0011536 (SeedPlants) Phylogenetic Tree(s): OG_03_0011536_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010112001
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00070910 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
AMTR_s00148p00070910 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 LandPlants
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.05 LandPlants
MA_137810g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 SeedPlants
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 536 567
IPR002885 Pentatricopeptide_repeat 575 624
IPR002885 Pentatricopeptide_repeat 718 764
IPR002885 Pentatricopeptide_repeat 373 422
IPR002885 Pentatricopeptide_repeat 268 316
IPR002885 Pentatricopeptide_repeat 645 693
IPR002885 Pentatricopeptide_repeat 169 197
IPR002885 Pentatricopeptide_repeat 341 371
IPR002885 Pentatricopeptide_repeat 792 818
IPR002885 Pentatricopeptide_repeat 451 467
No external refs found!