GSVIVT01009293001


Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor


Gene families : OG_01_0000068 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000068_tree ,
OG_02_0000090 (LandPlants) Phylogenetic Tree(s): OG_02_0000090_tree ,
OG_03_0000054 (SeedPlants) Phylogenetic Tree(s): OG_03_0000054_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009293001
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00227390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00058p00216470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00065p00077750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.07 Archaeplastida
AT1G79700 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Cre02.g100100 No alias No description available 0.01 Archaeplastida
Cre03.g144424 No alias No description available 0.02 Archaeplastida
LOC_Os03g12950.1 No alias no description available(sp|q84z02|crl5_orysj : 102.0) 0.02 Archaeplastida
MA_121578g0010 No alias transcription factor (AP2) 0.03 Archaeplastida
MA_98095g0010 No alias transcription factor (AP2) 0.04 Archaeplastida
Mp8g11450.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Pp3c6_21840V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Solyc02g092050.3.1 No alias transcription factor (AP2) 0.11 Archaeplastida
Solyc03g123430.4.1 No alias transcription factor (AP2) 0.04 Archaeplastida
Solyc04g077490.3.1 No alias transcription factor (AP2) 0.08 Archaeplastida
Solyc11g010710.2.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e038652_P002 No alias transcription factor (AP2) 0.04 Archaeplastida
AMTR_s00024p00227390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 LandPlants
AMTR_s00065p00077750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.07 LandPlants
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.03 LandPlants
LOC_Os07g03250.1 No alias transcription factor (AP2) 0.02 LandPlants
MA_98095g0010 No alias transcription factor (AP2) 0.02 LandPlants
Mp8g11450.1 No alias transcription factor (AP2) 0.03 LandPlants
Pp3c6_21840V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 LandPlants
Solyc02g092050.3.1 No alias transcription factor (AP2) 0.1 LandPlants
Solyc04g077490.3.1 No alias transcription factor (AP2) 0.08 LandPlants
Solyc05g051380.4.1 No alias transcription factor (AP2) 0.02 LandPlants
AMTR_s00024p00227390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 SeedPlants
AMTR_s00065p00077750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.07 SeedPlants
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.02 SeedPlants
Solyc02g092050.3.1 No alias transcription factor (AP2) 0.07 SeedPlants
Solyc04g077490.3.1 No alias transcription factor (AP2) 0.06 SeedPlants
Solyc05g051380.4.1 No alias transcription factor (AP2) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 80 129
No external refs found!