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  5. GSVIVT01008836001

GSVIVT01008836001


Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-3 component


Gene families : OG_01_0003815 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003815_tree ,
OG_02_0004658 (LandPlants) Phylogenetic Tree(s): OG_02_0004658_tree ,
OG_03_0004913 (SeedPlants) Phylogenetic Tree(s): OG_03_0004913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008836001
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00168080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
AT1G21720 PBC1 proteasome beta subunit C1 0.11 Archaeplastida
AT1G77440 PBC2 20S proteasome beta subunit C2 0.06 Archaeplastida
Cpa|evm.model.tig00000826.22 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Cre06.g267500 No alias Protein degradation.26S proteasome.20S core... 0.18 Archaeplastida
Gb_09326 No alias component beta type-3 of 26S proteasome 0.04 Archaeplastida
Gb_29749 No alias component beta type-3 of 26S proteasome 0.04 Archaeplastida
LOC_Os02g08520.1 No alias component beta type-3 of 26S proteasome 0.04 Archaeplastida
LOC_Os06g43570.1 No alias component beta type-3 of 26S proteasome 0.03 Archaeplastida
MA_549126g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_70161g0010 No alias component beta type-3 of 26S proteasome 0.03 Archaeplastida
Mp7g15370.1 No alias component beta type-3 of 26S proteasome 0.07 Archaeplastida
Pp3c7_520V3.1 No alias proteasome beta subunit C1 0.03 Archaeplastida
Smo266913 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
Solyc04g009410.3.1 No alias component beta type-3 of 26S proteasome 0.15 Archaeplastida
Zm00001e013846_P001 No alias component beta type-3 of 26S proteasome 0.07 Archaeplastida
Zm00001e030465_P001 No alias component beta type-3 of 26S proteasome 0.09 Archaeplastida
Zm00001e037487_P001 No alias component beta type-3 of 26S proteasome 0.12 Archaeplastida
AMTR_s00002p00168080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.02 LandPlants
AT1G21720 PBC1 proteasome beta subunit C1 0.11 LandPlants
AT1G77440 PBC2 20S proteasome beta subunit C2 0.06 LandPlants
Gb_09326 No alias component beta type-3 of 26S proteasome 0.04 LandPlants
Gb_29749 No alias component beta type-3 of 26S proteasome 0.04 LandPlants
LOC_Os02g08520.1 No alias component beta type-3 of 26S proteasome 0.04 LandPlants
LOC_Os06g43570.1 No alias component beta type-3 of 26S proteasome 0.03 LandPlants
MA_70161g0010 No alias component beta type-3 of 26S proteasome 0.03 LandPlants
Mp7g15370.1 No alias component beta type-3 of 26S proteasome 0.07 LandPlants
Pp3c7_520V3.1 No alias proteasome beta subunit C1 0.03 LandPlants
Smo266913 No alias Protein degradation.26S proteasome.20S core... 0.04 LandPlants
Solyc04g009410.3.1 No alias component beta type-3 of 26S proteasome 0.15 LandPlants
Zm00001e013846_P001 No alias component beta type-3 of 26S proteasome 0.07 LandPlants
Zm00001e030465_P001 No alias component beta type-3 of 26S proteasome 0.08 LandPlants
Zm00001e037487_P001 No alias component beta type-3 of 26S proteasome 0.12 LandPlants
AMTR_s00002p00168080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.02 SeedPlants
AT1G21720 PBC1 proteasome beta subunit C1 0.11 SeedPlants
AT1G77440 PBC2 20S proteasome beta subunit C2 0.06 SeedPlants
Gb_09326 No alias component beta type-3 of 26S proteasome 0.04 SeedPlants
Gb_29749 No alias component beta type-3 of 26S proteasome 0.04 SeedPlants
LOC_Os02g08520.1 No alias component beta type-3 of 26S proteasome 0.04 SeedPlants
LOC_Os06g43570.1 No alias component beta type-3 of 26S proteasome 0.03 SeedPlants
MA_70161g0010 No alias component beta type-3 of 26S proteasome 0.03 SeedPlants
Solyc04g009410.3.1 No alias component beta type-3 of 26S proteasome 0.12 SeedPlants
Zm00001e013846_P001 No alias component beta type-3 of 26S proteasome 0.07 SeedPlants
Zm00001e030465_P001 No alias component beta type-3 of 26S proteasome 0.08 SeedPlants
Zm00001e037487_P001 No alias component beta type-3 of 26S proteasome 0.12 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 189
No external refs found!