GSVIVT01007916001


Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.SMARCAL1-like group.SMARCAL1 chromatin remodeling factor


Gene families : OG_01_0005923 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005923_tree ,
OG_02_0009245 (LandPlants) Phylogenetic Tree(s): OG_02_0009245_tree ,
OG_03_0010620 (SeedPlants) Phylogenetic Tree(s): OG_03_0010620_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007916001
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AT5G07810 No alias SNF2 domain-containing protein / helicase... 0.05 Archaeplastida
Cpa|evm.model.tig00001368.11 No alias No description available 0.01 Archaeplastida
Cre12.g494200 No alias No description available 0.02 Archaeplastida
LOC_Os07g40730.1 No alias chromatin remodeling factor (SMARCAL1) 0.03 Archaeplastida
Pp3c1_13308V3.1 No alias SNF2 domain-containing protein / helicase... 0.04 Archaeplastida
AT5G07810 No alias SNF2 domain-containing protein / helicase... 0.05 LandPlants
Pp3c1_13308V3.1 No alias SNF2 domain-containing protein / helicase... 0.04 LandPlants
AT5G07810 No alias SNF2 domain-containing protein / helicase... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004519 endonuclease activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000330 SNF2_dom 223 456
IPR001650 Helicase_C 539 634
IPR002711 HNH 1069 1103
No external refs found!