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  5. GSVIVT01007785001

GSVIVT01007785001


Description : Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type)


Gene families : OG_01_0000137 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000137_tree ,
OG_02_0000296 (LandPlants) Phylogenetic Tree(s): OG_02_0000296_tree ,
OG_03_0001368 (SeedPlants) Phylogenetic Tree(s): OG_03_0001368_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007785001
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.04 Archaeplastida
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.03 Archaeplastida
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.04 Archaeplastida
LOC_Os05g42250.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 Archaeplastida
LOC_Os12g06570.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
MA_11172g0010 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Pp3c3_20390V3.1 No alias cyclic nucleotide-binding transporter 1 0.02 Archaeplastida
Solyc02g086990.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc03g116850.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Solyc08g069140.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Zm00001e017971_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.03 LandPlants
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.03 LandPlants
AT5G53130 ATCNGC1, CNGC1 cyclic nucleotide gated channel 1 0.02 LandPlants
Solyc03g116850.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
Solyc06g051920.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 LandPlants
Solyc08g069140.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 LandPlants
Zm00001e017971_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.03 SeedPlants
LOC_Os12g06570.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 SeedPlants
Solyc02g086990.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 452 539
IPR005821 Ion_trans_dom 30 352
No external refs found!