GSVIVT01003730001


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.YKT6-type protein


Gene families : OG_01_0003416 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003416_tree ,
OG_02_0003992 (LandPlants) Phylogenetic Tree(s): OG_02_0003992_tree ,
OG_03_0005540 (SeedPlants) Phylogenetic Tree(s): OG_03_0005540_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003730001
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.58 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre17.g728150 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
LOC_Os01g64650.2 No alias YKT6-type R-type SNARE longin protein 0.03 Archaeplastida
LOC_Os01g73300.1 No alias YKT6-type R-type SNARE longin protein 0.03 Archaeplastida
MA_100977g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_252882g0010 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_827461g0010 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp5g07670.1 No alias YKT6-type R-type SNARE longin protein 0.03 Archaeplastida
Smo166326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Solyc07g005200.3.1 No alias YKT6-type R-type SNARE longin protein 0.07 Archaeplastida
LOC_Os01g64650.2 No alias YKT6-type R-type SNARE longin protein 0.03 LandPlants
LOC_Os01g73300.1 No alias YKT6-type R-type SNARE longin protein 0.03 LandPlants
MA_827461g0010 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana... 0.04 LandPlants
Mp5g07670.1 No alias YKT6-type R-type SNARE longin protein 0.02 LandPlants
Smo166326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 LandPlants
Solyc07g005200.3.1 No alias YKT6-type R-type SNARE longin protein 0.04 LandPlants
LOC_Os01g64650.2 No alias YKT6-type R-type SNARE longin protein 0.03 SeedPlants
MA_100977g0010 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc07g005200.3.1 No alias YKT6-type R-type SNARE longin protein 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001388 Synaptobrevin 137 194
IPR010908 Longin_dom 48 112
No external refs found!