AT2G20080


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).


Gene families : OG_01_0010157 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010157_tree ,
OG_02_0010211 (LandPlants) Phylogenetic Tree(s): OG_02_0010211_tree ,
OG_03_0009150 (SeedPlants) Phylogenetic Tree(s): OG_03_0009150_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G20080
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g48530.1 No alias transcriptional repressor (TIE/SPL) 0.04 Archaeplastida
LOC_Os05g48570.1 No alias transcriptional repressor (TIE/SPL) 0.05 Archaeplastida
Solyc07g018370.3.1 No alias transcriptional repressor (TIE/SPL) 0.05 Archaeplastida
Solyc12g007240.3.1 No alias transcriptional repressor (TIE/SPL) 0.04 Archaeplastida
Zm00001e020173_P001 No alias transcriptional repressor (TIE/SPL) 0.05 Archaeplastida
Zm00001e026498_P002 No alias transcriptional repressor (TIE/SPL) 0.03 Archaeplastida
Zm00001e028063_P001 No alias transcriptional repressor (TIE/SPL) 0.05 Archaeplastida
LOC_Os01g48530.1 No alias transcriptional repressor (TIE/SPL) 0.04 LandPlants
LOC_Os05g48570.1 No alias transcriptional repressor (TIE/SPL) 0.04 LandPlants
Solyc07g018370.3.1 No alias transcriptional repressor (TIE/SPL) 0.04 LandPlants
Solyc12g007240.3.1 No alias transcriptional repressor (TIE/SPL) 0.03 LandPlants
Zm00001e020173_P001 No alias transcriptional repressor (TIE/SPL) 0.04 LandPlants
Zm00001e026498_P002 No alias transcriptional repressor (TIE/SPL) 0.03 LandPlants
Zm00001e028063_P001 No alias transcriptional repressor (TIE/SPL) 0.04 LandPlants
LOC_Os01g48530.1 No alias transcriptional repressor (TIE/SPL) 0.02 SeedPlants
LOC_Os05g48570.1 No alias transcriptional repressor (TIE/SPL) 0.03 SeedPlants
Solyc07g018370.3.1 No alias transcriptional repressor (TIE/SPL) 0.03 SeedPlants
Solyc12g007240.3.1 No alias transcriptional repressor (TIE/SPL) 0.03 SeedPlants
Zm00001e020173_P001 No alias transcriptional repressor (TIE/SPL) 0.03 SeedPlants
Zm00001e026498_P002 No alias transcriptional repressor (TIE/SPL) 0.03 SeedPlants
Zm00001e028063_P001 No alias transcriptional repressor (TIE/SPL) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0045892 negative regulation of transcription, DNA-templated ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!