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  5. GSVIVT01002809001

GSVIVT01002809001


Description : Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.Viridiplantae-specific components.OEC16 component PsbQ


Gene families : OG_01_0001933 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001933_tree ,
OG_02_0005846 (LandPlants) Phylogenetic Tree(s): OG_02_0005846_tree ,
OG_03_0007201 (SeedPlants) Phylogenetic Tree(s): OG_03_0007201_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002809001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00134700 evm_27.TU.AmTr_v1... No description available 0.16 Archaeplastida
AMTR_s00098p00154060 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.13 Archaeplastida
AMTR_s00098p00157610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.2 Archaeplastida
AT3G01440 PQL1, PQL2 PsbQ-like 1 0.03 Archaeplastida
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.21 Archaeplastida
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.14 Archaeplastida
Cre08.g372450 No alias Oxygen-evolving enhancer protein 3, chloroplastic... 0.1 Archaeplastida
Gb_04734 No alias component PsbQ of PS-II oxygen-evolving center 0.08 Archaeplastida
LOC_Os04g44200.1 No alias PsbQ-like protein 3, chloroplastic OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os07g01480.1 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.04 Archaeplastida
LOC_Os07g36080.1 No alias component PsbQ of PS-II oxygen-evolving center 0.16 Archaeplastida
MA_218996g0010 No alias component PsbQ of PS-II oxygen-evolving center 0.06 Archaeplastida
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.16 Archaeplastida
Pp3c13_6570V3.1 No alias photosystem II subunit QA 0.15 Archaeplastida
Pp3c3_2620V3.1 No alias photosystem II subunit QA 0.17 Archaeplastida
Pp3c5_4110V3.1 No alias photosystem II subunit QA 0.12 Archaeplastida
Smo106248 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 Archaeplastida
Solyc02g079950.3.1 No alias component PsbQ of PS-II oxygen-evolving center 0.18 Archaeplastida
Solyc10g006530.4.1 No alias Photosynthetic NDH subunit of lumenal location 3,... 0.06 Archaeplastida
Zm00001e007556_P001 No alias PsbQ-like protein 3, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e010513_P001 No alias component PsbQ of PS-II oxygen-evolving center 0.19 Archaeplastida
Zm00001e032657_P001 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.1 Archaeplastida
Zm00001e035180_P001 No alias no hits & (original description: none) 0.17 Archaeplastida
AMTR_s00098p00157610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.19 LandPlants
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.18 LandPlants
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.15 LandPlants
Gb_04734 No alias component PsbQ of PS-II oxygen-evolving center 0.1 LandPlants
LOC_Os07g36080.1 No alias component PsbQ of PS-II oxygen-evolving center 0.18 LandPlants
MA_218996g0010 No alias component PsbQ of PS-II oxygen-evolving center 0.04 LandPlants
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.16 LandPlants
Pp3c13_6570V3.1 No alias photosystem II subunit QA 0.13 LandPlants
Pp3c3_2620V3.1 No alias photosystem II subunit QA 0.15 LandPlants
Pp3c5_4110V3.1 No alias photosystem II subunit QA 0.13 LandPlants
Smo106248 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 LandPlants
Solyc02g079950.3.1 No alias component PsbQ of PS-II oxygen-evolving center 0.18 LandPlants
Zm00001e010513_P001 No alias component PsbQ of PS-II oxygen-evolving center 0.2 LandPlants
Zm00001e035180_P001 No alias no hits & (original description: none) 0.17 LandPlants
AMTR_s00098p00157610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.2 SeedPlants
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.19 SeedPlants
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.14 SeedPlants
Gb_04734 No alias component PsbQ of PS-II oxygen-evolving center 0.09 SeedPlants
LOC_Os07g36080.1 No alias component PsbQ of PS-II oxygen-evolving center 0.18 SeedPlants
MA_218996g0010 No alias component PsbQ of PS-II oxygen-evolving center 0.03 SeedPlants
Solyc02g079950.3.1 No alias component PsbQ of PS-II oxygen-evolving center 0.19 SeedPlants
Zm00001e010513_P001 No alias component PsbQ of PS-II oxygen-evolving center 0.21 SeedPlants
Zm00001e035180_P001 No alias no hits & (original description: none) 0.18 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008797 PSII_PsbQ 31 227
No external refs found!