AT2G18640 (GGPS4)


Aliases : GGPS4

Description : geranylgeranyl pyrophosphate synthase 4


Gene families : OG_01_0000728 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000728_tree ,
OG_02_0001040 (LandPlants) Phylogenetic Tree(s): OG_02_0001040_tree ,
OG_03_0001095 (SeedPlants) Phylogenetic Tree(s): OG_03_0001095_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G18640
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AT3G32040 No alias Terpenoid synthases superfamily protein 0.05 Archaeplastida
MA_10429253g0010 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida
MA_10429756g0010 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
MA_4877308g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_888237g0010 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
Smo133501 No alias Secondary metabolism.terpenoids.methylerythritol... 0.01 Archaeplastida
Solyc11g011240.1.1 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.01 LandPlants
AT3G32040 No alias Terpenoid synthases superfamily protein 0.02 SeedPlants
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.01 SeedPlants
Zm00001e035362_P001 No alias isoprenyl diphosphate synthase 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004311 farnesyltranstransferase activity IDA Interproscan
MF GO:0004311 farnesyltranstransferase activity IGI Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0008299 isoprenoid biosynthetic process ISS Interproscan
BP GO:0008299 isoprenoid biosynthetic process TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 108 342
No external refs found!