AT2G18300


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0000051 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000051_tree ,
OG_02_0000091 (LandPlants) Phylogenetic Tree(s): OG_02_0000091_tree ,
OG_03_0025265 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G18300
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AMTR_s00011p00241810 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.05 Archaeplastida
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
AT1G05805 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT5G58010 LRL3 LJRHL1-like 3 0.03 Archaeplastida
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
GSVIVT01033350001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01033356001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_36369 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
LOC_Os02g55250.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g08500.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g41060.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os08g39630.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os09g32510.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
LOC_Os09g33580.2 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.06 Archaeplastida
MA_10344244g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
MA_182616g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
MA_939320g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c20_590V3.1 No alias cryptochrome-interacting basic-helix-loop-helix 5 0.02 Archaeplastida
Pp3c21_14114V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Smo443113 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g109700.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc02g062690.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Solyc03g034000.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc03g097820.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc03g119390.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc12g010170.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g098620.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e023327_P001 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e034658_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e035219_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e036318_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
AMTR_s00011p00241810 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 LandPlants
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
Gb_12493 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 LandPlants
LOC_Os09g32510.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 LandPlants
LOC_Os09g33580.2 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 LandPlants
MA_10344244g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 LandPlants
Solyc01g109700.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 LandPlants
Solyc02g062690.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 LandPlants
Solyc03g034000.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 LandPlants
Solyc03g097820.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 LandPlants
Solyc03g119390.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 LandPlants
Solyc12g098620.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 LandPlants
Zm00001e034658_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0009299 mRNA transcription IDA Interproscan
BP GO:0009725 response to hormone IMP Interproscan
BP GO:0009735 response to cytokinin IEP Interproscan
BP GO:0009826 unidimensional cell growth IMP Interproscan
MF GO:0043425 bHLH transcription factor binding IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 195 242
No external refs found!