AT2G18280 (TLP2, AtTLP2)


Aliases : TLP2, AtTLP2

Description : tubby like protein 2


Gene families : OG_01_0000335 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000335_tree ,
OG_02_0000295 (LandPlants) Phylogenetic Tree(s): OG_02_0000295_tree ,
OG_03_0000341 (SeedPlants) Phylogenetic Tree(s): OG_03_0000341_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G18280
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00238180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.05 Archaeplastida
LOC_Os05g48670.1 No alias transcription factor (TUB) 0.04 Archaeplastida
Pp3c23_17770V3.1 No alias tubby like protein 3 0.04 Archaeplastida
Solyc03g033980.4.1 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e020185_P004 No alias transcription factor (TUB) 0.02 Archaeplastida
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.04 LandPlants
Pp3c23_17770V3.1 No alias tubby like protein 3 0.04 LandPlants
Solyc03g033980.4.1 No alias transcription factor (TUB) 0.03 LandPlants
Zm00001e020185_P004 No alias transcription factor (TUB) 0.02 LandPlants
Solyc01g104670.3.1 No alias transcription factor (TUB) 0.02 SeedPlants
Solyc03g033980.4.1 No alias transcription factor (TUB) 0.03 SeedPlants
Zm00001e039448_P004 No alias transcription factor (TUB) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
MF GO:0008081 phosphoric diester hydrolase activity ISS Interproscan
CC GO:0009536 plastid IDA Interproscan
BP GO:0009620 response to fungus IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001810 F-box_dom 47 95
IPR000007 Tubby_C 111 388
No external refs found!