Solyc12g096730.3.1


Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 489.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 237.3)


Gene families : OG_01_0000096 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000096_tree ,
OG_02_0001044 (LandPlants) Phylogenetic Tree(s): OG_02_0001044_tree ,
OG_03_0000479 (SeedPlants) Phylogenetic Tree(s): OG_03_0000479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g096730.3.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00198650 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.01 Archaeplastida
AMTR_s00019p00031370 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.01 Archaeplastida
AMTR_s00066p00135670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.01 Archaeplastida
AT1G56710 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G41850 ADPG2, PGAZAT polygalacturonase abscission zone A. thaliana 0.03 Archaeplastida
AT5G44830 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
AT5G44840 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.02 Archaeplastida
GSVIVT01032114001 No alias Polygalacturonase OS=Actinidia deliciosa 0.01 Archaeplastida
GSVIVT01032118001 No alias Cell wall.pectin.modification and... 0.01 Archaeplastida
GSVIVT01033303001 No alias Cell wall.pectin.modification and... 0.02 Archaeplastida
LOC_Os01g43490.1 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
MA_10431579g0010 No alias Polygalacturonase OS=Cryptomeria japonica... 0.02 Archaeplastida
Solyc04g025440.3.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.01 Archaeplastida
Solyc05g005040.4.1 No alias polygalacturonase (PGX1) 0.02 Archaeplastida
Solyc12g019220.1.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Zm00001e011814_P002 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 Archaeplastida
Zm00001e036989_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.01 Archaeplastida
AMTR_s00019p00031370 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.01 LandPlants
AMTR_s00066p00135670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.01 LandPlants
Solyc12g019220.1.1 No alias Polygalacturonase OS=Prunus persica... 0.01 LandPlants
AMTR_s00019p00031370 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.01 SeedPlants
AMTR_s00066p00135670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.01 SeedPlants
Solyc12g019220.1.1 No alias Polygalacturonase OS=Prunus persica... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 57 382
No external refs found!