Solyc12g089000.2.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_01_0000511 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000511_tree ,
OG_02_0003960 (LandPlants) Phylogenetic Tree(s): OG_02_0003960_tree ,
OG_03_0004443 (SeedPlants) Phylogenetic Tree(s): OG_03_0004443_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g089000.2.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003757001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
LOC_Os09g33876.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
MA_88915g0010 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Pp3c23_14640V3.1 No alias IBR domain-containing protein 0.02 Archaeplastida
Pp3c24_15470V3.1 No alias IBR domain-containing protein 0.03 Archaeplastida
Pp3c26_11830V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
Pp3c26_11830V3.1 No alias RING/U-box superfamily protein 0.04 LandPlants
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002867 IBR_dom 204 267
IPR002867 IBR_dom 283 324
No external refs found!