Solyc12g088650.2.1


Description : cyclin (CYCD)


Gene families : OG_01_0000252 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000252_tree ,
OG_02_0007997 (LandPlants) Phylogenetic Tree(s): OG_02_0007997_tree ,
OG_03_0005800 (SeedPlants) Phylogenetic Tree(s): OG_03_0005800_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088650.2.1
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AT5G02110 CYCD7;1, CYCD7 CYCLIN D7;1 0.02 Archaeplastida
GSVIVT01000451001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.08 Archaeplastida
Gb_37608 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.02 Archaeplastida
LOC_Os12g39830.1 No alias cyclin (CYCD) 0.04 Archaeplastida
MA_93221g0010 No alias cyclin (CYCD) 0.02 Archaeplastida
Pp3c9_8300V3.1 No alias CYCLIN D1;1 0.02 Archaeplastida
Zm00001e009441_P003 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e018000_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e033498_P001 No alias cyclin (CYCD) 0.06 Archaeplastida
Zm00001e035215_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 LandPlants
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 SeedPlants
Gb_03361 No alias cyclin (CYCD) 0.01 SeedPlants

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 61 169
IPR004367 Cyclin_C-dom 171 275
No external refs found!