Solyc12g088230.3.1


Description : calcium-permeable channel (OSCA)


Gene families : OG_01_0000175 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000175_tree ,
OG_02_0001215 (LandPlants) Phylogenetic Tree(s): OG_02_0001215_tree ,
OG_03_0001435 (SeedPlants) Phylogenetic Tree(s): OG_03_0001435_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088230.3.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 Archaeplastida
LOC_Os12g43720.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Pp3c9_16680V3.1 No alias hypothetical protein 1 0.03 Archaeplastida
Smo41460 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 Archaeplastida
LOC_Os12g43720.1 No alias calcium-permeable channel (OSCA) 0.03 LandPlants
Mp5g05890.1 No alias calcium-permeable channel (OSCA) 0.02 LandPlants
Pp3c9_16680V3.1 No alias hypothetical protein 1 0.03 LandPlants
LOC_Os12g43720.1 No alias calcium-permeable channel (OSCA) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003864 RSN1_7TM 350 615
IPR027815 PHM7_cyt 187 339
IPR032880 Csc1_N 6 165
No external refs found!