AT2G17180


Description : C2H2-like zinc finger protein


Gene families : OG_01_0000103 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000103_tree ,
OG_02_0000039 (LandPlants) Phylogenetic Tree(s): OG_02_0000039_tree ,
OG_03_0007008 (SeedPlants) Phylogenetic Tree(s): OG_03_0007008_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G17180
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00085760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AT4G16610 No alias C2H2-like zinc finger protein 0.04 Archaeplastida
AT5G56200 No alias C2H2 type zinc finger transcription factor family 0.02 Archaeplastida
GSVIVT01037851001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_10422 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os04g46670.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc06g005180.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
AT4G16610 No alias C2H2-like zinc finger protein 0.04 LandPlants
GSVIVT01031461001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
Gb_30808 No alias C2H2 zinc finger transcription factor 0.01 LandPlants
Solyc06g005180.1.1 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Solyc06g075775.1.1 No alias C2H2 zinc finger transcription factor 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0048235 pollen sperm cell differentiation IEP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!