Solyc12g044410.2.1


Description : transcription factor (HD-ZIP III)


Gene families : OG_01_0000862 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000862_tree ,
OG_02_0000983 (LandPlants) Phylogenetic Tree(s): OG_02_0000983_tree ,
OG_03_0000998 (SeedPlants) Phylogenetic Tree(s): OG_03_0000998_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g044410.2.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00085520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00148p00033940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00155p00069240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.03 Archaeplastida
GSVIVT01017010001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01035612001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_02083 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
Gb_18240 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Gb_18245 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
LOC_Os03g01890.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
LOC_Os03g43930.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
LOC_Os12g41860.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
MA_107764g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g24140.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Pp3c4_5300V3.1 No alias homeobox gene 8 0.02 Archaeplastida
Zm00001e000073_P001 No alias transcription factor (HD-ZIP III) 0.08 Archaeplastida
Zm00001e003226_P004 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Zm00001e004553_P004 No alias transcription factor (HD-ZIP III) 0.08 Archaeplastida
Zm00001e005034_P001 No alias transcription factor (HD-ZIP III) 0.09 Archaeplastida
Zm00001e012408_P002 No alias transcription factor (HD-ZIP III) 0.1 Archaeplastida
Zm00001e018118_P002 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
Zm00001e025995_P002 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e039093_P002 No alias transcription factor (HD-ZIP III) 0.07 Archaeplastida
AMTR_s00056p00085520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 LandPlants
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.03 LandPlants
GSVIVT01017010001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 LandPlants
GSVIVT01035612001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 LandPlants
Gb_02083 No alias transcription factor (HD-ZIP III) 0.02 LandPlants
Gb_18245 No alias transcription factor (HD-ZIP III) 0.02 LandPlants
LOC_Os12g41860.1 No alias transcription factor (HD-ZIP III) 0.02 LandPlants
Mp1g24140.1 No alias transcription factor (HD-ZIP III) 0.02 LandPlants
Zm00001e000073_P001 No alias transcription factor (HD-ZIP III) 0.05 LandPlants
Zm00001e004553_P004 No alias transcription factor (HD-ZIP III) 0.05 LandPlants
Zm00001e005034_P001 No alias transcription factor (HD-ZIP III) 0.06 LandPlants
Zm00001e012408_P002 No alias transcription factor (HD-ZIP III) 0.05 LandPlants
Zm00001e018118_P002 No alias transcription factor (HD-ZIP III) 0.04 LandPlants
Zm00001e039093_P002 No alias transcription factor (HD-ZIP III) 0.04 LandPlants
AMTR_s00056p00085520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 SeedPlants
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.03 SeedPlants
GSVIVT01017010001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 SeedPlants
GSVIVT01035612001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 SeedPlants
Gb_02083 No alias transcription factor (HD-ZIP III) 0.02 SeedPlants
LOC_Os12g41860.1 No alias transcription factor (HD-ZIP III) 0.02 SeedPlants
Zm00001e000073_P001 No alias transcription factor (HD-ZIP III) 0.03 SeedPlants
Zm00001e004553_P004 No alias transcription factor (HD-ZIP III) 0.04 SeedPlants
Zm00001e005034_P001 No alias transcription factor (HD-ZIP III) 0.05 SeedPlants
Zm00001e012408_P002 No alias transcription factor (HD-ZIP III) 0.03 SeedPlants
Zm00001e039093_P002 No alias transcription factor (HD-ZIP III) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013978 MEKHLA 694 836
IPR002913 START_lipid-bd_dom 160 367
IPR001356 Homeobox_dom 16 74
No external refs found!