Solyc12g035130.2.1


Description : ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris (sp|p46942|db10_nicsy : 939.0)


Gene families : OG_01_0000695 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000695_tree ,
OG_02_0001582 (LandPlants) Phylogenetic Tree(s): OG_02_0001582_tree ,
OG_03_0001971 (SeedPlants) Phylogenetic Tree(s): OG_03_0001971_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g035130.2.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cre01.g021600 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana 0.07 Archaeplastida
Cre06.g291150 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_35545 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.04 Archaeplastida
MA_5118g0010 No alias ATP-dependent RNA helicase-like protein DB10... 0.03 Archaeplastida
Mp1g25330.1 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.05 Archaeplastida
Pp3c7_8530V3.1 No alias DEAD box RNA helicase 1 0.02 Archaeplastida
Gb_35545 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.02 LandPlants
MA_5118g0010 No alias ATP-dependent RNA helicase-like protein DB10... 0.03 LandPlants
Mp1g25330.1 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.05 LandPlants
Pp3c7_8530V3.1 No alias DEAD box RNA helicase 1 0.02 LandPlants
MA_5118g0010 No alias ATP-dependent RNA helicase-like protein DB10... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 170 339
IPR001650 Helicase_C 377 485
No external refs found!