Solyc12g013810.2.1


Description : M-type thioredoxin


Gene families : OG_01_0000516 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000516_tree ,
OG_02_0000996 (LandPlants) Phylogenetic Tree(s): OG_02_0000996_tree ,
OG_03_0001150 (SeedPlants) Phylogenetic Tree(s): OG_03_0001150_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g013810.2.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00016000 evm_27.TU.AmTr_v1... Redox homeostasis.chloroplast redox homeostasis.M-type... 0.12 Archaeplastida
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.18 Archaeplastida
AT1G43560 Aty2, ty2 thioredoxin Y2 0.06 Archaeplastida
AT1G50320 THX, ATHX, ATX thioredoxin X 0.16 Archaeplastida
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.22 Archaeplastida
Cpa|evm.model.tig00001477.10 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.02 Archaeplastida
Cpa|evm.model.tig00020563.189 No alias No description available 0.02 Archaeplastida
Cre01.g052250 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.02 Archaeplastida
GSVIVT01010012001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.09 Archaeplastida
GSVIVT01014360001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.1 Archaeplastida
GSVIVT01026149001 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.09 Archaeplastida
GSVIVT01034548001 No alias Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.1 Archaeplastida
Gb_00914 No alias M-type thioredoxin 0.09 Archaeplastida
Gb_31181 No alias M-type thioredoxin 0.08 Archaeplastida
Gb_37068 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os04g57930.1 No alias X-type thioredoxin 0.12 Archaeplastida
LOC_Os12g08730.1 No alias M-type thioredoxin 0.11 Archaeplastida
MA_474303g0010 No alias M-type thioredoxin 0.05 Archaeplastida
Mp4g18950.1 No alias M-type thioredoxin 0.25 Archaeplastida
Pp3c24_4980V3.1 No alias thioredoxin X 0.13 Archaeplastida
Pp3c25_2880V3.1 No alias thioredoxin M-type 1 0.17 Archaeplastida
Pp3c5_23070V3.1 No alias thioredoxin M-type 1 0.11 Archaeplastida
Pp3c6_10040V3.1 No alias Thioredoxin superfamily protein 0.2 Archaeplastida
Pp3c6_10090V3.1 No alias thioredoxin M-type 1 0.04 Archaeplastida
Smo230724 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.03 Archaeplastida
Zm00001e006545_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e018385_P001 No alias M-type thioredoxin 0.08 Archaeplastida
Zm00001e039586_P001 No alias M-type thioredoxin 0.12 Archaeplastida
Zm00001e041929_P001 No alias X-type thioredoxin 0.03 Archaeplastida
AMTR_s00071p00016000 evm_27.TU.AmTr_v1... Redox homeostasis.chloroplast redox homeostasis.M-type... 0.12 LandPlants
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.18 LandPlants
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.23 LandPlants
GSVIVT01010012001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.1 LandPlants
GSVIVT01014360001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.09 LandPlants
Gb_00914 No alias M-type thioredoxin 0.07 LandPlants
Gb_31181 No alias M-type thioredoxin 0.07 LandPlants
LOC_Os12g08730.1 No alias M-type thioredoxin 0.11 LandPlants
MA_474303g0010 No alias M-type thioredoxin 0.05 LandPlants
Mp4g18950.1 No alias M-type thioredoxin 0.26 LandPlants
Pp3c25_2880V3.1 No alias thioredoxin M-type 1 0.16 LandPlants
Pp3c5_23070V3.1 No alias thioredoxin M-type 1 0.12 LandPlants
Pp3c6_10040V3.1 No alias Thioredoxin superfamily protein 0.19 LandPlants
Pp3c6_10090V3.1 No alias thioredoxin M-type 1 0.03 LandPlants
Smo230724 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.03 LandPlants
Zm00001e018385_P001 No alias M-type thioredoxin 0.06 LandPlants
Zm00001e039586_P001 No alias M-type thioredoxin 0.11 LandPlants
AMTR_s00071p00016000 evm_27.TU.AmTr_v1... Redox homeostasis.chloroplast redox homeostasis.M-type... 0.12 SeedPlants
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.18 SeedPlants
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.23 SeedPlants
GSVIVT01010012001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.1 SeedPlants
GSVIVT01014360001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.09 SeedPlants
Gb_00914 No alias M-type thioredoxin 0.07 SeedPlants
Gb_31181 No alias M-type thioredoxin 0.07 SeedPlants
LOC_Os12g08730.1 No alias M-type thioredoxin 0.1 SeedPlants
MA_474303g0010 No alias M-type thioredoxin 0.05 SeedPlants
Zm00001e018385_P001 No alias M-type thioredoxin 0.06 SeedPlants
Zm00001e039586_P001 No alias M-type thioredoxin 0.11 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 79 176
No external refs found!