Solyc12g009590.2.1

Description : methylation reader (MBD10-11)

Gene families : OG_01_0003057 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003057_tree ,
OG_02_0002066 (LandPlants) Phylogenetic Tree(s): OG_02_0002066_tree ,
OG_03_0002151 (SeedPlants) Phylogenetic Tree(s): OG_03_0002151_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g009590.2.1
Cluster	HCCA: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00169140	evm_27.TU.AmTr_v1...	Methyl-CpG-binding domain-containing protein 11...	0.02	Archaeplastida
GSVIVT01017330001	No alias	Methyl-CpG-binding domain-containing protein 10...	0.03	Archaeplastida
Gb_00760	No alias	methylation reader (MBD10-11)	0.03	Archaeplastida
Solyc06g068140.3.1	No alias	methylation reader (MBD10-11)	0.04	Archaeplastida
Zm00001e004995_P005	No alias	methylation reader (MBD10-11)	0.03	Archaeplastida
AMTR_s00004p00169140	evm_27.TU.AmTr_v1...	Methyl-CpG-binding domain-containing protein 11...	0.02	LandPlants
GSVIVT01017330001	No alias	Methyl-CpG-binding domain-containing protein 10...	0.03	LandPlants
Gb_00760	No alias	methylation reader (MBD10-11)	0.03	LandPlants
Solyc06g068140.3.1	No alias	methylation reader (MBD10-11)	0.04	LandPlants
Zm00001e004995_P005	No alias	methylation reader (MBD10-11)	0.03	LandPlants
AMTR_s00004p00169140	evm_27.TU.AmTr_v1...	Methyl-CpG-binding domain-containing protein 11...	0.02	SeedPlants
Gb_00760	No alias	methylation reader (MBD10-11)	0.03	SeedPlants
Gb_14552	No alias	methylation reader (MBD10-11)	0.02	SeedPlants
Solyc06g068140.3.1	No alias	methylation reader (MBD10-11)	0.04	SeedPlants
Zm00001e004995_P005	No alias	methylation reader (MBD10-11)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	12	75

External Links

No external refs found!