AT2G15900


Description : Phox-associated domain;Phox-like;Sorting nexin, C-terminal


Gene families : OG_01_0001307 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001307_tree ,
OG_02_0001836 (LandPlants) Phylogenetic Tree(s): OG_02_0001836_tree ,
OG_03_0005279 (SeedPlants) Phylogenetic Tree(s): OG_03_0005279_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G15900
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00210260 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
GSVIVT01031845001 No alias No description available 0.07 Archaeplastida
Gb_00123 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_37388 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g50660.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os11g06040.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10428627g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_116182g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_32559g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9996748g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c2_2780V3.1 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.02 Archaeplastida
Smo413327 No alias No description available 0.05 Archaeplastida
Solyc01g108920.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g044220.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032556_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
AMTR_s00059p00210260 evm_27.TU.AmTr_v1... No description available 0.06 LandPlants
GSVIVT01031845001 No alias No description available 0.06 LandPlants
Gb_00123 No alias no hits & (original description: none) 0.02 LandPlants
Gb_15275 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os05g50660.1 No alias no hits & (original description: none) 0.12 LandPlants
LOC_Os11g06040.1 No alias no hits & (original description: none) 0.04 LandPlants
MA_10428627g0010 No alias no hits & (original description: none) 0.02 LandPlants
Smo413327 No alias No description available 0.04 LandPlants
Solyc01g108920.4.1 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e032556_P002 No alias no hits & (original description: none) 0.02 LandPlants
AMTR_s00059p00210260 evm_27.TU.AmTr_v1... No description available 0.06 SeedPlants
GSVIVT01031845001 No alias No description available 0.06 SeedPlants
Gb_15275 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os11g06040.1 No alias no hits & (original description: none) 0.04 SeedPlants
MA_10428627g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc01g108920.4.1 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e024629_P003 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process RCA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0006487 protein N-linked glycosylation RCA Interproscan
BP GO:0007165 signal transduction ISS Interproscan
MF GO:0035091 phosphatidylinositol binding ISS Interproscan
BP GO:0035556 intracellular signal transduction ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001683 PX_dom 515 617
IPR003114 Phox_assoc 105 280
IPR013937 Sorting_nexin_C 815 956
No external refs found!