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  5. Solyc12g006280.3.1

Solyc12g006280.3.1


Description : Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana (sp|q700d9|mybf_arath : 84.0)


Gene families : OG_01_0000027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000027_tree ,
OG_02_0000101 (LandPlants) Phylogenetic Tree(s): OG_02_0000101_tree ,
OG_03_0000391 (SeedPlants) Phylogenetic Tree(s): OG_03_0000391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006280.3.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G04605 No alias No description available 0.05 Archaeplastida
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.05 Archaeplastida
GSVIVT01012707001 No alias No description available 0.03 Archaeplastida
GSVIVT01013085001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Gb_08427 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_25992 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os02g14490.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
LOC_Os03g20900.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_937875g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c12_11150V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c19_2940V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c1_41530V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c23_3520V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Solyc03g006150.2.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.07 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
AT4G04605 No alias No description available 0.03 LandPlants
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01013085001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 LandPlants
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.04 LandPlants
Gb_08427 No alias G2-like GARP transcription factor 0.03 LandPlants
Gb_25992 No alias G2-like GARP transcription factor 0.03 LandPlants
Gb_40510 No alias G2-like GARP transcription factor 0.03 LandPlants
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.02 LandPlants
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.03 LandPlants
MA_10432937g0010 No alias G2-like GARP transcription factor 0.04 LandPlants
MA_138039g0010 No alias G2-like GARP transcription factor 0.02 LandPlants
MA_52379g0010 No alias G2-like GARP transcription factor 0.02 LandPlants
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.04 LandPlants
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.06 LandPlants
Solyc03g006150.2.1 No alias Putative Myb family transcription factor At1g14600... 0.03 LandPlants
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.03 LandPlants
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.02 LandPlants
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.04 LandPlants
AT4G04605 No alias No description available 0.03 SeedPlants
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 SeedPlants
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.02 SeedPlants
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.03 SeedPlants
MA_52379g0010 No alias G2-like GARP transcription factor 0.02 SeedPlants
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 31 81
No external refs found!