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  5. Solyc11g066020.2.1

Solyc11g066020.2.1


Description : RING-HC-class E3 ligase


Gene families : OG_01_0001840 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001840_tree ,
OG_02_0001934 (LandPlants) Phylogenetic Tree(s): OG_02_0001934_tree ,
OG_03_0004532 (SeedPlants) Phylogenetic Tree(s): OG_03_0004532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g066020.2.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00181530 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
LOC_Os05g02130.1 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
AMTR_s00012p00181530 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
Zm00001e018493_P002 No alias RING-HC-class E3 ligase 0.02 LandPlants
AMTR_s00012p00181530 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 15 108
IPR020683 Ankyrin_rpt-contain_dom 110 184
No external refs found!