Solyc11g065720.2.1


Description : subfamily ABCC transporter


Gene families : OG_01_0000058 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000058_tree ,
OG_02_0000363 (LandPlants) Phylogenetic Tree(s): OG_02_0000363_tree ,
OG_03_0001693 (SeedPlants) Phylogenetic Tree(s): OG_03_0001693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g065720.2.1
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00229050 evm_27.TU.AmTr_v1... ABC transporter C family member 8 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00092p00037330 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00507p00011670 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AT1G30400 ABCC1, ATABCC1,... multidrug resistance-associated protein 1 0.03 Archaeplastida
AT3G13100 ABCC7, ATMRP7, MRP7 multidrug resistance-associated protein 7 0.03 Archaeplastida
GSVIVT01018403001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01027990001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_05522 No alias subfamily ABCC transporter 0.03 Archaeplastida
Gb_12211 No alias ABC transporter C family member 13 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os04g13220.1 No alias subfamily ABCC transporter 0.04 Archaeplastida
MA_10436190g0030 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.02 Archaeplastida
MA_10436190g0040 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.02 Archaeplastida
MA_629244g0010 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp2g22040.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp4g11790.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp4g15590.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp5g02230.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Mp5g13190.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Pp3c21_19700V3.1 No alias multidrug resistance-associated protein 5 0.04 Archaeplastida
Smo94 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00056p00229050 evm_27.TU.AmTr_v1... ABC transporter C family member 8 OS=Arabidopsis thaliana 0.04 LandPlants
AMTR_s00507p00011670 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 LandPlants
MA_10436190g0030 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.02 LandPlants
MA_10436190g0040 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.02 LandPlants
MA_128615g0010 No alias No annotation 0.02 LandPlants
MA_629244g0010 No alias subfamily ABCC transporter 0.02 LandPlants
Smo169678 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 426 574
IPR011527 ABC1_TM_dom 95 348
No external refs found!