Solyc11g044470.3.1


Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana (sp|q9m1s3|arp1_arath : 118.0)


Gene families : OG_01_0000639 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000639_tree ,
OG_02_0000548 (LandPlants) Phylogenetic Tree(s): OG_02_0000548_tree ,
OG_03_0000334 (SeedPlants) Phylogenetic Tree(s): OG_03_0000334_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g044470.3.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00053460 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00099p00115860 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G33470 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.12 Archaeplastida
AT5G53680 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
GSVIVT01027434001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01037134001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g17760.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 Archaeplastida
MA_18853g0020 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e015892_P001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e018568_P001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e028635_P002 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e037573_P001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.04 Archaeplastida
AMTR_s00099p00115860 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 LandPlants
AT1G33470 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.12 LandPlants
AT5G53680 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
GSVIVT01037134001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.03 LandPlants
Zm00001e028635_P002 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 LandPlants
AT1G33470 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.1 SeedPlants
AT5G53680 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 SeedPlants
GSVIVT01027434001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 SeedPlants
Zm00001e019085_P001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 15 70
No external refs found!