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  5. Solyc11g040370.2.1

Solyc11g040370.2.1


Description : no hits & (original description: none)


Gene families : OG_01_0001895 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001895_tree ,
OG_02_0001910 (LandPlants) Phylogenetic Tree(s): OG_02_0001910_tree ,
OG_03_0001734 (SeedPlants) Phylogenetic Tree(s): OG_03_0001734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g040370.2.1
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT1G33680 No alias KH domain-containing protein 0.05 Archaeplastida
AT2G25970 No alias KH domain-containing protein 0.05 Archaeplastida
Cpa|evm.model.tig00020553.157 No alias Protein BTR1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre06.g250800 No alias No description available 0.04 Archaeplastida
GSVIVT01035354001 No alias No description available 0.06 Archaeplastida
GSVIVT01036378001 No alias No description available 0.06 Archaeplastida
Gb_04922 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os02g13130.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g01930.1 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10434164g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_13061g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Pp3c11_17830V3.1 No alias KH domain-containing protein 0.03 Archaeplastida
Pp3c7_11410V3.1 No alias KH domain-containing protein 0.02 Archaeplastida
Zm00001e014452_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e021868_P005 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e024927_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e029163_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.08 LandPlants
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.07 LandPlants
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.05 LandPlants
AT1G33680 No alias KH domain-containing protein 0.05 LandPlants
AT2G25970 No alias KH domain-containing protein 0.04 LandPlants
GSVIVT01035354001 No alias No description available 0.05 LandPlants
GSVIVT01036378001 No alias No description available 0.06 LandPlants
Gb_04922 No alias no hits & (original description: none) 0.02 LandPlants
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.06 LandPlants
LOC_Os02g13130.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os08g01930.1 No alias no hits & (original description: none) 0.06 LandPlants
MA_10434164g0020 No alias no hits & (original description: none) 0.03 LandPlants
MA_13061g0010 No alias no hits & (original description: none) 0.07 LandPlants
Mp3g07780.1 No alias no hits & (original description: none) 0.01 LandPlants
Pp3c11_17830V3.1 No alias KH domain-containing protein 0.02 LandPlants
Pp3c7_11410V3.1 No alias KH domain-containing protein 0.02 LandPlants
Zm00001e014452_P001 No alias no hits & (original description: none) 0.11 LandPlants
Zm00001e021868_P005 No alias no hits & (original description: none) 0.05 LandPlants
Zm00001e024927_P001 No alias no hits & (original description: none) 0.08 LandPlants
Zm00001e029163_P001 No alias no hits & (original description: none) 0.09 LandPlants
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.07 SeedPlants
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.06 SeedPlants
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.04 SeedPlants
AT1G33680 No alias KH domain-containing protein 0.03 SeedPlants
AT2G25970 No alias KH domain-containing protein 0.03 SeedPlants
GSVIVT01035354001 No alias No description available 0.05 SeedPlants
GSVIVT01036378001 No alias No description available 0.05 SeedPlants
Gb_04922 No alias no hits & (original description: none) 0.02 SeedPlants
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.05 SeedPlants
LOC_Os02g13130.1 No alias no hits & (original description: none) 0.03 SeedPlants
LOC_Os08g01930.1 No alias no hits & (original description: none) 0.05 SeedPlants
MA_10434164g0020 No alias no hits & (original description: none) 0.03 SeedPlants
MA_13061g0010 No alias no hits & (original description: none) 0.07 SeedPlants
Zm00001e014452_P001 No alias no hits & (original description: none) 0.1 SeedPlants
Zm00001e021868_P005 No alias no hits & (original description: none) 0.04 SeedPlants
Zm00001e024927_P001 No alias no hits & (original description: none) 0.07 SeedPlants
Zm00001e029163_P001 No alias no hits & (original description: none) 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 211 277
IPR004088 KH_dom_type_1 307 373
No external refs found!