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  5. Solyc11g010840.2.1

Solyc11g010840.2.1


Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana (sp|q8w4b1|rcf3_arath : 167.0)


Gene families : OG_01_0000393 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000393_tree ,
OG_02_0110865 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0088845 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g010840.2.1
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00221750 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein RCF3... 0.05 Archaeplastida
AMTR_s00092p00116010 evm_27.TU.AmTr_v1... KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT5G15270 No alias RNA-binding KH domain-containing protein 0.03 Archaeplastida
AT5G64390 HEN4 RNA-binding KH domain-containing protein 0.04 Archaeplastida
GSVIVT01009261001 No alias RNA-binding KH domain-containing protein RCF3... 0.03 Archaeplastida
GSVIVT01018244001 No alias RNA-binding KH domain-containing protein PEPPER... 0.02 Archaeplastida
GSVIVT01038571001 No alias RNA-binding KH domain-containing protein RCF3... 0.05 Archaeplastida
MA_10429211g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
Zm00001e004486_P005 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e026127_P004 No alias RNA-binding KH domain-containing protein RCF3... 0.03 Archaeplastida
Zm00001e037947_P004 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 36 86
IPR004088 KH_dom_type_1 547 608
IPR004088 KH_dom_type_1 141 201
No external refs found!