Solyc11g008710.2.1

Description : component mtRPS5 of small ribosomal subunit proteome

Gene families : OG_01_0005914 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005914_tree ,
OG_02_0008275 (LandPlants) Phylogenetic Tree(s): OG_02_0008275_tree ,
OG_03_0008374 (SeedPlants) Phylogenetic Tree(s): OG_03_0008374_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g008710.2.1
Cluster	HCCA: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00202100	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.06	Archaeplastida
AT1G64880	No alias	Ribosomal protein S5 family protein	0.16	Archaeplastida
Cre09.g407100	No alias	No description available	0.01	Archaeplastida
GSVIVT01020716001	No alias	Protein biosynthesis.organelle translation...	0.05	Archaeplastida
Gb_41243	No alias	component mtRPS5 of small ribosomal subunit proteome	0.06	Archaeplastida
LOC_Os02g01230.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.11	Archaeplastida
MA_10285340g0010	No alias	No annotation	0.03	Archaeplastida
MA_955371g0010	No alias	component mtRPS5 of small ribosomal subunit proteome	0.05	Archaeplastida
Mp4g01640.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.04	Archaeplastida
Pp3c8_16260V3.1	No alias	Ribosomal protein S5 family protein	0.01	Archaeplastida
Zm00001e013392_P001	No alias	no hits & (original description: none)	0.11	Archaeplastida
AMTR_s00039p00202100	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.06	LandPlants
AT1G64880	No alias	Ribosomal protein S5 family protein	0.16	LandPlants
GSVIVT01020716001	No alias	Protein biosynthesis.organelle translation...	0.05	LandPlants
Gb_41243	No alias	component mtRPS5 of small ribosomal subunit proteome	0.05	LandPlants
LOC_Os02g01230.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.11	LandPlants
MA_10285340g0010	No alias	No annotation	0.03	LandPlants
Mp4g01640.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.04	LandPlants
Pp3c8_16260V3.1	No alias	Ribosomal protein S5 family protein	0.01	LandPlants
Zm00001e013392_P001	No alias	no hits & (original description: none)	0.1	LandPlants
AMTR_s00039p00202100	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.06	SeedPlants
AT1G64880	No alias	Ribosomal protein S5 family protein	0.15	SeedPlants
GSVIVT01020716001	No alias	Protein biosynthesis.organelle translation...	0.05	SeedPlants
Gb_41243	No alias	component mtRPS5 of small ribosomal subunit proteome	0.05	SeedPlants
LOC_Os02g01230.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.11	SeedPlants
MA_10285340g0010	No alias	No annotation	0.03	SeedPlants
Zm00001e013392_P001	No alias	no hits & (original description: none)	0.1	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005324	Ribosomal_S5_C	423	490
IPR013810	Ribosomal_S5_N	345	409

External Links

No external refs found!

Solyc11g008710.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation