Solyc10g085790.2.1


Description : DBP5/LOS4 ATP-dependent helicase


Gene families : OG_01_0002890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002890_tree ,
OG_02_0002756 (LandPlants) Phylogenetic Tree(s): OG_02_0002756_tree ,
OG_03_0003041 (SeedPlants) Phylogenetic Tree(s): OG_03_0003041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g085790.2.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000203.32 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
Cre06.g306850 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
LOC_Os03g06220.1 No alias DBP5/LOS4 ATP-dependent helicase 0.03 Archaeplastida
MA_932318g0010 No alias ligand-gated cation channel (GLR) 0.01 Archaeplastida
Mp6g02580.1 No alias DBP5/LOS4 ATP-dependent helicase 0.02 Archaeplastida
Smo160867 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
Smo447130 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
Zm00001e000442_P003 No alias DBP5/LOS4 ATP-dependent helicase 0.05 Archaeplastida
LOC_Os03g06220.1 No alias DBP5/LOS4 ATP-dependent helicase 0.03 LandPlants
Mp6g02580.1 No alias DBP5/LOS4 ATP-dependent helicase 0.02 LandPlants
Smo160867 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 LandPlants
Smo447130 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 LandPlants
Zm00001e000442_P003 No alias DBP5/LOS4 ATP-dependent helicase 0.05 LandPlants
LOC_Os03g06220.1 No alias DBP5/LOS4 ATP-dependent helicase 0.01 SeedPlants
Zm00001e000442_P003 No alias DBP5/LOS4 ATP-dependent helicase 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 125 297
IPR001650 Helicase_C 347 457
No external refs found!