Cre10.g432800

Description : 29.2.1.2.1.31 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue. 40s ribosomal protein SA (P40)

Gene families : OG_01_0002645 (Gene family) Phylogenetic Tree(s): OG0002645_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Cre10.g432800
Cluster	HCCA cluster: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AT1G72370	P40, AP40, RPSAA, RP40	40s ribosomal protein SA	0.25	Gene family
GSVIVT01016695001	No alias	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.18	Gene family
LOC_Os03g08440	Os03g0182600	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.02	Gene family
LOC_Os07g42450	Os07g0616600	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.14	Gene family
MA_10436984g0020	No alias	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.02	Gene family
MA_112104g0010	No alias	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.05	Gene family
Smo36118	PACid_15406812	No description available	0.02	Gene family
Solyc03g019780.3.1	Solyc03g019780.3	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.17	Gene family
Solyc06g072120.3.1	Solyc06g072120.3	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.18	Gene family
Zm00001d006871	GRMZM2G159237	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.15	Gene family
Zm00001d027527	GRMZM2G092719	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.22	Gene family
Zm00001d048253	GRMZM2G099657	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.15	Gene family
Zm00001d048346	GRMZM2G126821	29.2.1.2.1.31 protein.synthesis.ribosomal...	0.18	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan
CC	GO:0005840	ribosome	IEA	InterProScan
BP	GO:0006412	translation	IEA	InterProScan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001865	Ribosomal_S2	107	179

External Links

No external refs found!

Cre10.g432800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation