AT2G06530 (VPS2.1)


Aliases : VPS2.1

Description : SNF7 family protein


Gene families : OG_01_0001089 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001089_tree ,
OG_02_0004324 (LandPlants) Phylogenetic Tree(s): OG_02_0004324_tree ,
OG_03_0004747 (SeedPlants) Phylogenetic Tree(s): OG_03_0004747_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G06530
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00151310 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
Cpa|evm.model.tig00020510.41 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
Cre17.g735400 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
GSVIVT01028365001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
Gb_23887 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 Archaeplastida
LOC_Os11g47710.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 Archaeplastida
Solyc06g008280.2.1 No alias Vacuolar protein sorting-associated protein 2 homolog 3... 0.02 Archaeplastida
Solyc12g009060.2.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.05 Archaeplastida
Zm00001e033163_P001 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 Archaeplastida
Solyc12g009060.2.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.04 LandPlants
Zm00001e033163_P001 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 LandPlants
MA_96110g0010 No alias component VPS2/CHMP2 of ESCRT-III complex 0.02 SeedPlants
Solyc12g009060.2.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 SeedPlants
Zm00001e033163_P001 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0000815 ESCRT III complex ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005771 multivesicular body IDA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0010200 response to chitin RCA Interproscan
BP GO:0015031 protein transport IMP Interproscan
BP GO:0016192 vesicle-mediated transport ISS Interproscan
BP GO:0042542 response to hydrogen peroxide RCA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005024 Snf7_fam 18 187
No external refs found!