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  5. Solyc10g047570.2.1

Solyc10g047570.2.1


Description : Exopolygalacturonase (Fragment) OS=Platanus acerifolia (sp|q6h9k0|pglr2_plaac : 307.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 235.6)


Gene families : OG_01_0000535 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000535_tree ,
OG_02_0000281 (LandPlants) Phylogenetic Tree(s): OG_02_0000281_tree ,
OG_03_0000124 (SeedPlants) Phylogenetic Tree(s): OG_03_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g047570.2.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00019p00058670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.04 Archaeplastida
GSVIVT01028044001 No alias Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01030023001 No alias Polygalacturonase OS=Gossypium hirsutum 0.05 Archaeplastida
GSVIVT01035102001 No alias Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035103001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia 0.04 Archaeplastida
Solyc01g009640.3.1 No alias No annotation 0.06 Archaeplastida
Solyc10g047590.3.1 No alias Polygalacturonase OS=Gossypium hirsutum... 0.06 Archaeplastida
Zm00001e030526_P001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.03 Archaeplastida
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 LandPlants
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.02 LandPlants
GSVIVT01030023001 No alias Polygalacturonase OS=Gossypium hirsutum 0.02 LandPlants
Solyc01g009640.3.1 No alias No annotation 0.05 LandPlants
Solyc02g069480.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.03 LandPlants
Solyc10g047590.3.1 No alias Polygalacturonase OS=Gossypium hirsutum... 0.06 LandPlants
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.02 SeedPlants
GSVIVT01035102001 No alias Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.02 SeedPlants
Solyc01g009640.3.1 No alias No annotation 0.04 SeedPlants
Solyc02g069480.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 SeedPlants
Solyc10g047590.3.1 No alias Polygalacturonase OS=Gossypium hirsutum... 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 60 378
No external refs found!