AT2G05620 (PGR5)

Aliases : PGR5

Description : proton gradient regulation 5

Gene families : OG_01_0004690 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004690_tree ,
OG_02_0004361 (LandPlants) Phylogenetic Tree(s): OG_02_0004361_tree ,
OG_03_0004397 (SeedPlants) Phylogenetic Tree(s): OG_03_0004397_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G05620
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00119820	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.cyclic electron...	0.03	Archaeplastida
Cre05.g242400	No alias	Photosynthesis.photophosphorylation.cyclic electron...	0.03	Archaeplastida
GSVIVT01027902001	No alias	Photosynthesis.photophosphorylation.cyclic electron...	0.05	Archaeplastida
Gb_30188	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.09	Archaeplastida
LOC_Os08g45190.1	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.08	Archaeplastida
Pp3c24_11690V3.1	No alias	proton gradient regulation 5	0.04	Archaeplastida
Solyc09g090570.2.1	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.05	Archaeplastida
Zm00001e003846_P001	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.05	Archaeplastida
Zm00001e022011_P001	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.04	Archaeplastida
GSVIVT01027902001	No alias	Photosynthesis.photophosphorylation.cyclic electron...	0.05	LandPlants
Gb_30188	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.08	LandPlants
LOC_Os08g45190.1	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.06	LandPlants
Pp3c24_11690V3.1	No alias	proton gradient regulation 5	0.03	LandPlants
Solyc09g090570.2.1	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.05	LandPlants
Zm00001e003846_P001	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.05	LandPlants
Zm00001e022011_P001	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.03	LandPlants
AMTR_s00077p00119820	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.cyclic electron...	0.02	SeedPlants
GSVIVT01027902001	No alias	Photosynthesis.photophosphorylation.cyclic electron...	0.05	SeedPlants
Gb_30188	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.08	SeedPlants
LOC_Os08g45190.1	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.06	SeedPlants
Solyc09g090570.2.1	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.05	SeedPlants
Zm00001e003846_P001	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.05	SeedPlants
Zm00001e022011_P001	No alias	component PGR5-like of cyclic electron flow PGR5/PGRL1 complex	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	IMP	Interproscan
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009414	response to water deprivation	IMP	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	RCA	Interproscan
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	IMP	Interproscan
BP	GO:0009644	response to high light intensity	RCA	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009767	photosynthetic electron transport chain	None	Extended
BP	GO:0009773	photosynthetic electron transport in photosystem I	IMP	Interproscan
BP	GO:0009773	photosynthetic electron transport in photosystem I	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010114	response to red light	RCA	Interproscan
BP	GO:0010117	photoprotection	IMP	Interproscan
BP	GO:0010155	regulation of proton transport	RCA	Interproscan
BP	GO:0010218	response to far red light	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0022900	electron transport chain	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071484	cellular response to light intensity	IMP	Interproscan
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1904062	regulation of cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G05620 (PGR5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation