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  5. Solyc10g012240.3.1

Solyc10g012240.3.1


Description : ubiquitin-conjugating E2 protein


Gene families : OG_01_0001573 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001573_tree ,
OG_02_0002278 (LandPlants) Phylogenetic Tree(s): OG_02_0002278_tree ,
OG_03_0002600 (SeedPlants) Phylogenetic Tree(s): OG_03_0002600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g012240.3.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT2G46030 UBC6 ubiquitin-conjugating enzyme 6 0.03 Archaeplastida
Cpa|evm.model.tig00021432.10 No alias Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre01.g027200 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_03972 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
Pp3c13_22880V3.1 No alias ubiquitin-conjugating enzyme 5 0.03 Archaeplastida
Smo58974 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc10g012320.3.1 No alias ubiquitin-conjugating E2 protein 0.04 Archaeplastida
Solyc11g071870.2.1 No alias ubiquitin-conjugating E2 protein 0.01 Archaeplastida
AT1G63800 UBC5 ubiquitin-conjugating enzyme 5 0.02 LandPlants
GSVIVT01026953001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Pp3c13_22880V3.1 No alias ubiquitin-conjugating enzyme 5 0.02 LandPlants
Solyc11g071870.2.1 No alias ubiquitin-conjugating E2 protein 0.01 LandPlants
AT1G63800 UBC5 ubiquitin-conjugating enzyme 5 0.02 SeedPlants
AT5G41340 UBC4, ATUBC4 ubiquitin conjugating enzyme 4 0.01 SeedPlants
GSVIVT01026953001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Gb_18257 No alias ubiquitin-conjugating E2 protein 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 142
No external refs found!