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  5. Solyc10g006270.4.1

Solyc10g006270.4.1


Description : No annotation


Gene families : OG_01_0000927 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000927_tree ,
OG_02_0001268 (LandPlants) Phylogenetic Tree(s): OG_02_0001268_tree ,
OG_03_0088444 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g006270.4.1
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00146990 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 Archaeplastida
AT1G62040 ATG8C Ubiquitin-like superfamily protein 0.04 Archaeplastida
Cre16.g689650 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 Archaeplastida
Gb_08297 No alias ATG8 autophagosome ubiquitin-fold protein 0.04 Archaeplastida
Gb_21524 No alias ATG8 autophagosome ubiquitin-fold protein 0.07 Archaeplastida
LOC_Os07g32800.2 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
MA_10426292g0030 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Pp3c14_15141V3.1 No alias Ubiquitin-like superfamily protein 0.03 Archaeplastida
Pp3c1_32170V3.1 No alias Ubiquitin-like superfamily protein 0.05 Archaeplastida
Pp3c1_32190V3.1 No alias Ubiquitin-like superfamily protein 0.02 Archaeplastida
Solyc01g068060.4.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Zm00001e039966_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 Archaeplastida
AT1G62040 ATG8C Ubiquitin-like superfamily protein 0.04 LandPlants
Gb_08297 No alias ATG8 autophagosome ubiquitin-fold protein 0.04 LandPlants
LOC_Os07g32800.2 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 LandPlants
MA_10426292g0030 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 LandPlants
Pp3c14_15141V3.1 No alias Ubiquitin-like superfamily protein 0.03 LandPlants
Pp3c1_32170V3.1 No alias Ubiquitin-like superfamily protein 0.05 LandPlants
Pp3c1_32190V3.1 No alias Ubiquitin-like superfamily protein 0.02 LandPlants
Zm00001e039966_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!