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  5. Solyc10g005660.3.1

Solyc10g005660.3.1


Description : component CSN6 of COP9 signalosome complex


Gene families : OG_01_0004574 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004574_tree ,
OG_02_0006852 (LandPlants) Phylogenetic Tree(s): OG_02_0006852_tree ,
OG_03_0007778 (SeedPlants) Phylogenetic Tree(s): OG_03_0007778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005660.3.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00048280 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 Archaeplastida
Cre11.g467647 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 Archaeplastida
LOC_Os08g39070.1 No alias component CSN6 of COP9 signalosome complex 0.06 Archaeplastida
MA_54782g0010 No alias No annotation 0.03 Archaeplastida
Mp8g14630.1 No alias component CSN6 of COP9 signalosome complex 0.07 Archaeplastida
Zm00001e003448_P001 No alias component CSN6 of COP9 signalosome complex 0.04 Archaeplastida
Zm00001e024353_P001 No alias component CSN6 of COP9 signalosome complex 0.06 Archaeplastida
AMTR_s00061p00048280 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 LandPlants
GSVIVT01014869001 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 LandPlants
LOC_Os08g39070.1 No alias component CSN6 of COP9 signalosome complex 0.06 LandPlants
MA_54782g0010 No alias No annotation 0.03 LandPlants
Mp8g14630.1 No alias component CSN6 of COP9 signalosome complex 0.07 LandPlants
Zm00001e003448_P001 No alias component CSN6 of COP9 signalosome complex 0.04 LandPlants
Zm00001e024353_P001 No alias component CSN6 of COP9 signalosome complex 0.06 LandPlants
AMTR_s00061p00048280 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 SeedPlants
GSVIVT01014869001 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 SeedPlants
LOC_Os08g39070.1 No alias component CSN6 of COP9 signalosome complex 0.06 SeedPlants
MA_54782g0010 No alias No annotation 0.03 SeedPlants
Zm00001e003448_P001 No alias component CSN6 of COP9 signalosome complex 0.04 SeedPlants
Zm00001e024353_P001 No alias component CSN6 of COP9 signalosome complex 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 7 132
IPR024969 Rpn11/EIF3F_C 180 294
No external refs found!