Solyc09g091500.3.1


Description : component LSm5 of U6-associated LSm accessory ribonucleoprotein complex


Gene families : OG_01_0007103 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007103_tree ,
OG_02_0007972 (LandPlants) Phylogenetic Tree(s): OG_02_0007972_tree ,
OG_03_0009522 (SeedPlants) Phylogenetic Tree(s): OG_03_0009522_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g091500.3.1
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000553.39 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.02 Archaeplastida
GSVIVT01029076001 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.1 Archaeplastida
Gb_06645 No alias component LSm5 of U6-associated LSm accessory... 0.04 Archaeplastida
LOC_Os05g32310.1 No alias component LSm5 of U6-associated LSm accessory... 0.05 Archaeplastida
MA_63657g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031574_P001 No alias component LSm5 of U6-associated LSm accessory... 0.03 Archaeplastida
GSVIVT01029076001 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.1 LandPlants
Gb_06645 No alias component LSm5 of U6-associated LSm accessory... 0.04 LandPlants
LOC_Os05g32310.1 No alias component LSm5 of U6-associated LSm accessory... 0.05 LandPlants
MA_63657g0010 No alias no hits & (original description: none) 0.03 LandPlants
Pp3c1_36020V3.1 No alias Small nuclear ribonucleoprotein family protein 0.02 LandPlants
Zm00001e031574_P001 No alias component LSm5 of U6-associated LSm accessory... 0.03 LandPlants
GSVIVT01029076001 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.06 SeedPlants
LOC_Os05g32310.1 No alias component LSm5 of U6-associated LSm accessory... 0.03 SeedPlants
MA_63657g0010 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e031574_P001 No alias component LSm5 of U6-associated LSm accessory... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 14 81
No external refs found!