Solyc09g090660.3.1


Description : component MAC3 of non-snRNP MOS4-associated complex


Gene families : OG_01_0003024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003024_tree ,
OG_02_0003757 (LandPlants) Phylogenetic Tree(s): OG_02_0003757_tree ,
OG_03_0006760 (SeedPlants) Phylogenetic Tree(s): OG_03_0006760_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090660.3.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00212570 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.04 Archaeplastida
Cpa|evm.model.tig00001501.3 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Cpa|evm.model.tig00001501.4 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Cpa|evm.model.tig00021493.5 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre02.g073650 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 Archaeplastida
LOC_Os10g32880.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.08 Archaeplastida
MA_20260g0010 No alias component MAC3 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Pp3c5_9900V3.1 No alias MOS4-associated complex 3A 0.04 Archaeplastida
Pp3c6_19920V3.1 No alias MOS4-associated complex 3A 0.03 Archaeplastida
Smo437541 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 Archaeplastida
Zm00001e004625_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.05 Archaeplastida
Zm00001e012723_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.04 Archaeplastida
AMTR_s00039p00212570 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.05 LandPlants
GSVIVT01027911001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 LandPlants
LOC_Os10g32880.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.07 LandPlants
MA_20260g0010 No alias component MAC3 of non-snRNP MOS4-associated complex 0.03 LandPlants
Mp4g08560.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.02 LandPlants
Pp3c5_9900V3.1 No alias MOS4-associated complex 3A 0.04 LandPlants
Pp3c6_19920V3.1 No alias MOS4-associated complex 3A 0.02 LandPlants
Smo437541 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 LandPlants
Zm00001e004625_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.05 LandPlants
Zm00001e012723_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.04 LandPlants
AMTR_s00039p00212570 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.04 SeedPlants
GSVIVT01027911001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 SeedPlants
LOC_Os10g32880.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.07 SeedPlants
MA_20260g0010 No alias component MAC3 of non-snRNP MOS4-associated complex 0.03 SeedPlants
Zm00001e004625_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.05 SeedPlants
Zm00001e012723_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 387 422
IPR001680 WD40_repeat 254 291
IPR001680 WD40_repeat 483 511
IPR003613 Ubox_domain 3 55
IPR013915 Pre-mRNA_splic_Prp19 66 131
No external refs found!