Cre10.g424400


Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom Encodes 20S proteasome beta subunit PBB1 (PBB1). PBB1


Gene families : OG_01_0004729 (Gene family) Phylogenetic Tree(s): OG0004729_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre10.g424400
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT3G27430 PBB1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.03 Gene family
AT5G40580 PBB2 20S proteasome beta subunit PBB2 0.07 Gene family
GSVIVT01000574001 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family
LOC_Os05g09490 Os05g0187000 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
MA_10436996g0010 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family
Smo149251 PACid_15409235 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.04 Gene family
Solyc04g024420.3.1 Solyc04g024420.3 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.06 Gene family
Solyc05g013820.3.1 Solyc05g013820.3 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.12 Gene family
Zm00001d019262 GRMZM2G074549 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
Zm00001d035915 GRMZM2G140867 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.19 Gene family

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan
CC GO:0005839 proteasome core complex IEA InterProScan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 32 212
No external refs found!