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  5. Solyc09g090160.3.1

Solyc09g090160.3.1


Description : RING-HC-class E3 ligase


Gene families : OG_01_0003141 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003141_tree ,
OG_02_0003032 (LandPlants) Phylogenetic Tree(s): OG_02_0003032_tree ,
OG_03_0005168 (SeedPlants) Phylogenetic Tree(s): OG_03_0005168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090160.3.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g26490.1 No alias RING-HC-class E3 ligase 0.05 Archaeplastida
Zm00001e033402_P002 No alias RING-HC-class E3 ligase 0.05 Archaeplastida
LOC_Os07g26490.1 No alias RING-HC-class E3 ligase 0.05 LandPlants
Mp1g29560.1 No alias RING-HC-class E3 ligase 0.02 LandPlants
Zm00001e033402_P002 No alias RING-HC-class E3 ligase 0.05 LandPlants
LOC_Os07g26490.1 No alias RING-HC-class E3 ligase 0.04 SeedPlants
Zm00001e033402_P002 No alias RING-HC-class E3 ligase 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 40 69
No external refs found!