Solyc09g075020.3.1


Description : subfamily ABCC transporter


Gene families : OG_01_0000058 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000058_tree ,
OG_02_0001822 (LandPlants) Phylogenetic Tree(s): OG_02_0001822_tree ,
OG_03_0004319 (SeedPlants) Phylogenetic Tree(s): OG_03_0004319_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g075020.3.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT1G30420 ATMRP12, MRP12, ABCC11 multidrug resistance-associated protein 12 0.03 Archaeplastida
GSVIVT01010326001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01014631001 No alias ABC transporter C family member 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021595001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01037789001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Gb_12211 No alias ABC transporter C family member 13 OS=Arabidopsis... 0.02 Archaeplastida
Gb_36600 No alias subfamily ABCC transporter 0.03 Archaeplastida
Gb_37462 No alias subfamily ABCC transporter 0.02 Archaeplastida
LOC_Os01g25386.1 No alias subfamily ABCC transporter 0.04 Archaeplastida
LOC_Os03g04920.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
LOC_Os04g13210.1 No alias subfamily ABCC transporter 0.05 Archaeplastida
MA_10431617g0010 No alias subfamily ABCC transporter 0.03 Archaeplastida
MA_10434414g0010 No alias ABC transporter C family member 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_10436190g0020 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.03 Archaeplastida
MA_10436190g0030 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.03 Archaeplastida
MA_10436190g0040 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.03 Archaeplastida
MA_11781g0010 No alias subfamily ABCC transporter 0.03 Archaeplastida
MA_11781g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_275824g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_602830g0010 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.04 Archaeplastida
MA_629244g0010 No alias subfamily ABCC transporter 0.03 Archaeplastida
MA_8849g0010 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp1g25480.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp2g22040.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Mp4g11950.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Mp4g15590.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Mp5g13190.1 No alias subfamily ABCC transporter 0.05 Archaeplastida
Mp7g13860.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Smo163776 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo402326 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo93699 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo94 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Zm00001e007114_P002 No alias subfamily ABCC transporter 0.02 Archaeplastida
Zm00001e038918_P002 No alias subfamily ABCC transporter 0.03 Archaeplastida
LOC_Os01g25386.1 No alias subfamily ABCC transporter 0.03 LandPlants
Mp5g13190.1 No alias subfamily ABCC transporter 0.03 LandPlants
Smo93699 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 958 1207
IPR011527 ABC1_TM_dom 339 602
IPR003439 ABC_transporter-like 667 800
IPR003439 ABC_transporter-like 1288 1436
No external refs found!