Solyc09g074510.3.1


Description : transcription factor (TUB)


Gene families : OG_01_0000335 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000335_tree ,
OG_02_0000295 (LandPlants) Phylogenetic Tree(s): OG_02_0000295_tree ,
OG_03_0000341 (SeedPlants) Phylogenetic Tree(s): OG_03_0000341_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g074510.3.1
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00040910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
Gb_21935 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os01g48370.1 No alias transcription factor (TUB) 0.03 Archaeplastida
Pp3c20_2160V3.1 No alias tubby like protein 3 0.02 Archaeplastida
Pp3c8_18450V3.1 No alias tubby like protein 3 0.03 Archaeplastida
Zm00001e007472_P001 No alias transcription factor (TUB) 0.04 Archaeplastida
Zm00001e028052_P001 No alias transcription factor (TUB) 0.02 Archaeplastida
AMTR_s00040p00040910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.02 LandPlants
Gb_21935 No alias transcription factor (TUB) 0.03 LandPlants
LOC_Os01g48370.1 No alias transcription factor (TUB) 0.03 LandPlants
AMTR_s00040p00040910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.02 SeedPlants
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.02 SeedPlants
Gb_21935 No alias transcription factor (TUB) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001810 F-box_dom 44 93
IPR000007 Tubby_C 108 391
No external refs found!