AT2G03710 (AGL3, SEP4)

Aliases : AGL3, SEP4

Description : K-box region and MADS-box transcription factor family protein

Gene families : OG_01_0000011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000011_tree ,
OG_02_0000008 (LandPlants) Phylogenetic Tree(s): OG_02_0000008_tree ,
OG_03_0041849 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G03710
Cluster	HCCA: Cluster_224

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os04g52410.2	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
LOC_Os05g11380.1	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
MA_9382435g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e005708_P002	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
Zm00001e006950_P001	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
Zm00001e010125_P001	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
Zm00001e015447_P001	No alias	transcription factor (MADS/AGL)	0.04	Archaeplastida
Zm00001e015924_P003	No alias	transcription factor (MADS/AGL)	0.06	Archaeplastida
Zm00001e023236_P005	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
Zm00001e023825_P002	No alias	transcription factor (MADS/AGL)	0.05	Archaeplastida
Zm00001e027031_P001	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
Zm00001e027034_P001	No alias	transcription factor (MADS/AGL)	0.03	Archaeplastida
Zm00001e034629_P001	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
Zm00001e036159_P001	No alias	transcription factor (MADS/AGL)	0.06	Archaeplastida
Zm00001e039774_P001	No alias	transcription factor (MADS/AGL)	0.03	Archaeplastida
GSVIVT01001437001	No alias	RNA biosynthesis.transcriptional activation.MADS box...	0.02	LandPlants
LOC_Os02g07430.1	No alias	transcription factor (MADS/AGL)	0.01	LandPlants
LOC_Os04g52410.2	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
LOC_Os05g11380.1	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
LOC_Os12g10540.3	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e000846_P003	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e003667_P001	No alias	transcription factor (MADS/AGL)	0.01	LandPlants
Zm00001e005708_P002	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e006950_P001	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e010125_P001	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e015447_P001	No alias	transcription factor (MADS/AGL)	0.04	LandPlants
Zm00001e023236_P005	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e027031_P001	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e027034_P001	No alias	transcription factor (MADS/AGL)	0.03	LandPlants
Zm00001e031267_P003	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e034629_P001	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e038716_P004	No alias	transcription factor (MADS/AGL)	0.02	LandPlants
Zm00001e039774_P001	No alias	transcription factor (MADS/AGL)	0.03	LandPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	TAS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009409	response to cold	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010048	vernalization response	RCA	Interproscan
BP	GO:0010074	maintenance of meristem identity	None	Extended
BP	GO:0010076	maintenance of floral meristem identity	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019827	stem cell population maintenance	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043473	pigmentation	None	Extended
BP	GO:0043476	pigment accumulation	None	Extended
BP	GO:0043478	pigment accumulation in response to UV light	None	Extended
BP	GO:0043479	pigment accumulation in tissues in response to UV light	None	Extended
BP	GO:0043480	pigment accumulation in tissues	None	Extended
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	RCA	Interproscan
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048440	carpel development	IMP	Interproscan
BP	GO:0048440	carpel development	RCA	Interproscan
BP	GO:0048441	petal development	IMP	Interproscan
BP	GO:0048442	sepal development	IMP	Interproscan
BP	GO:0048443	stamen development	IMP	Interproscan
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098727	maintenance of cell number	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	86	172
IPR002100	TF_MADSbox	10	57

External Links

No external refs found!

AT2G03710 (AGL3, SEP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation