Cre10.g420900


Description : 29.2.2.2.1 protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0003051 (Gene family) Phylogenetic Tree(s): OG0003051_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre10.g420900
Cluster HCCA cluster: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT4G16630 No alias DEA(D/H)-box RNA helicase family protein 0.03 Gene family
Cpa|evm.model.tig00000792.35 No alias 29.2.2.2.1 protein.synthesis.ribosome... 0.16 Gene family
GSVIVT01009935001 No alias 29.2.2.2.1 protein.synthesis.ribosome... 0.18 Gene family
LOC_Os12g29660 Os12g0481100 29.2.2.2.1 protein.synthesis.ribosome... 0.08 Gene family
MA_11961g0010 No alias 29.2.2.2.1 protein.synthesis.ribosome... 0.02 Gene family
MA_956864g0010 No alias 29.2.2.2.1 protein.synthesis.ribosome... 0.02 Gene family
Smo107914 PACid_15402178 29.2.2.2.1 protein.synthesis.ribosome... 0.04 Gene family
Smo75384 PACid_15412124 27.1 RNA.processing P-loop containing nucleoside... 0.02 Gene family
Solyc04g081580.3.1 Solyc04g081580.3 29.2.2.2.1 protein.synthesis.ribosome... 0.14 Gene family
Zm00001d006113 GRMZM2G420865 29.2.2.2.1 protein.synthesis.ribosome... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 295 464
IPR001650 Helicase_C 510 615
No external refs found!