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  5. Solyc09g031930.3.1

Solyc09g031930.3.1


Description : KH domain-containing protein At2g38610 OS=Arabidopsis thaliana (sp|q9zvi3|qkil3_arath : 440.0)


Gene families : OG_01_0001008 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001008_tree ,
OG_02_0000848 (LandPlants) Phylogenetic Tree(s): OG_02_0000848_tree ,
OG_03_0001767 (SeedPlants) Phylogenetic Tree(s): OG_03_0001767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g031930.3.1
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00192730 evm_27.TU.AmTr_v1... KH domain-containing protein At1g09660/At1g09670... 0.03 Archaeplastida
AT5G56140 No alias RNA-binding KH domain-containing protein 0.04 Archaeplastida
GSVIVT01029865001 No alias KH domain-containing protein At3g08620 OS=Arabidopsis thaliana 0.04 Archaeplastida
Zm00001e019028_P002 No alias KH domain-containing protein At1g09660/At1g09670... 0.03 Archaeplastida
Zm00001e023400_P001 No alias KH domain-containing protein At5g56140 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e033145_P002 No alias KH domain-containing protein SPIN1 OS=Oryza sativa... 0.03 Archaeplastida
AMTR_s00071p00192730 evm_27.TU.AmTr_v1... KH domain-containing protein At1g09660/At1g09670... 0.03 LandPlants
AT5G56140 No alias RNA-binding KH domain-containing protein 0.03 LandPlants
GSVIVT01029865001 No alias KH domain-containing protein At3g08620 OS=Arabidopsis thaliana 0.03 LandPlants
LOC_Os05g34670.1 No alias KH domain-containing protein At1g09660/At1g09670... 0.01 LandPlants
Zm00001e019028_P002 No alias KH domain-containing protein At1g09660/At1g09670... 0.02 LandPlants
Zm00001e023400_P001 No alias KH domain-containing protein At5g56140 OS=Arabidopsis... 0.03 LandPlants
Zm00001e033145_P002 No alias KH domain-containing protein SPIN1 OS=Oryza sativa... 0.02 LandPlants
AMTR_s00071p00192730 evm_27.TU.AmTr_v1... KH domain-containing protein At1g09660/At1g09670... 0.02 SeedPlants
GSVIVT01029865001 No alias KH domain-containing protein At3g08620 OS=Arabidopsis thaliana 0.03 SeedPlants
LOC_Os05g34670.1 No alias KH domain-containing protein At1g09660/At1g09670... 0.01 SeedPlants
Zm00001e033145_P002 No alias KH domain-containing protein SPIN1 OS=Oryza sativa... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032377 STAR_dimer 27 73
IPR004088 KH_dom_type_1 144 185
No external refs found!