Solyc09g015930.3.1


Description : DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica (sp|q0db53|rh52a_orysj : 303.0)


Gene families : OG_01_0007416 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007416_tree ,
OG_02_0008404 (LandPlants) Phylogenetic Tree(s): OG_02_0008404_tree ,
OG_03_0012656 (SeedPlants) Phylogenetic Tree(s): OG_03_0012656_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g015930.3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
MA_10430358g0020 No alias No annotation 0.03 Archaeplastida
Pp3c1_12370V3.1 No alias DEA(D/H)-box RNA helicase family protein 0.03 Archaeplastida
Pp3c2_25130V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
MA_10430358g0020 No alias No annotation 0.03 LandPlants
Pp3c2_25130V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 LandPlants
MA_10430358g0020 No alias No annotation 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 138 309
IPR001650 Helicase_C 344 462
No external refs found!