AT2G02960


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG_01_0000436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000436_tree ,
OG_02_0000506 (LandPlants) Phylogenetic Tree(s): OG_02_0000506_tree ,
OG_03_0001067 (SeedPlants) Phylogenetic Tree(s): OG_03_0001067_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G02960
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cre09.g400738 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
LOC_Os02g36740.1 No alias RING-v-class E3 ligase 0.04 Archaeplastida
LOC_Os02g36740.1 No alias RING-v-class E3 ligase 0.04 LandPlants
Zm00001e025697_P001 No alias RING-v-class E3 ligase 0.02 LandPlants
LOC_Os11g38800.1 No alias RING-v-class E3 ligase 0.01 SeedPlants
Zm00001e009834_P004 No alias RING-v-class E3 ligase 0.01 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022143 DUF3675 94 212
IPR011016 Znf_RING-CH 43 88
No external refs found!