Cre10.g418100


Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom Encodes the alpha-3 subunit of 20s proteasome. 20S proteasome alpha subunit C1 (PAC1)


Gene families : OG_01_0005379 (Gene family) Phylogenetic Tree(s): OG0005379_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre10.g418100
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT3G22110 PAC1 20S proteasome alpha subunit C1 0.02 Gene family
Cpa|evm.model.tig00020965.21 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.16 Gene family
LOC_Os06g07140 Os06g0167600 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
LOC_Os06g07978 Os06g0177100 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.01 Gene family
MA_474079g0010 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.04 Gene family
Solyc02g081700.1.1 Solyc02g081700.1 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.2 Gene family
Zm00001d036319 GRMZM2G120047 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
Zm00001d045194 GRMZM2G005080 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA InterProScan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 29 217
IPR000426 Proteasome_asu_N 5 27
No external refs found!